Insertion junction: LMJ.RY0402.055304_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.055304
Chromosome:chromosome 12
Location:4325026
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre12.g520000 (1 of 2) PF00023//PF12796//PF13920 - Ankyrin repeat (Ank) // Ankyrin repeats (3 copies) (Ank_2) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCGAGCCCCCATACCACTGCTGCTGCGA
Internal bar code:AATGGGCAACCGTACTGGTCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:294
LEAP-Seq percent confirming:99.5962
LEAP-Seq n confirming:1480
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GGCATTTCACAGTGGGAGTT
Suggested primer 2:ATCTCTGGCTTTGAGTTCGC