Insertion junction: LMJ.RY0402.055477_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.055477
Chromosome:chromosome 1
Location:4129602
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCATGCGCTGAGCAGGCCGCCTCTGGAT
Internal bar code:GGCCCCTGCGCGCGCGGTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:439
LEAP-Seq percent confirming:93.7161
LEAP-Seq n confirming:865
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CGGAGCTGACGTTCTAGAGG
Suggested primer 2:TAGGACATGAGCAGGAGGCT