Insertion junction: LMJ.RY0402.057246_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.057246
Chromosome:chromosome 16
Location:5256556
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTGCAGGCCAGCCTGTTTTGAGGGCTAC
Internal bar code:GCGATGGCGGTACCGGCCGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:918
LEAP-Seq percent confirming:99.556
LEAP-Seq n confirming:1794
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCGCTCCTAGCATACA
Suggested primer 2:GATTGAGACTGTGGGGCCTA