Insertion junction: LMJ.RY0402.057623_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.057623
Chromosome:chromosome 1
Location:5923211
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g042200 PBA1,PBAS1 Photosystem II Associated Subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGAAGAATCGTTAGGTGCAGAGCCGTGG
Internal bar code:AGAGGGGCGCAGGTCAATGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1005
LEAP-Seq percent confirming:99.3591
LEAP-Seq n confirming:4806
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:TGCAACAGTTGTGTGAGCAA
Suggested primer 2:TTAGAGCGTGCCGATCTTTT