Insertion junction: LMJ.RY0402.057845_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.057845
Chromosome:chromosome 2
Location:2001264
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATTGGATTAATGGATATGGGCGTTCCTTA
Internal bar code:AGCTGAAGACTATGTCGAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1121
LEAP-Seq percent confirming:99.7236
LEAP-Seq n confirming:2165
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGTGCTTGTTGGCGTTTG
Suggested primer 2:TATTAAGAAGGGCGTGTGGG