Insertion junction: LMJ.RY0402.059501_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.059501
Chromosome:chromosome 9
Location:3083429
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g387000 CGL34 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTTCGGTAGCTTCTGTTTCGCCGTTTCC
Internal bar code:TGGTGTTGGTGGCGGACCCAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:915
LEAP-Seq percent confirming:99.3989
LEAP-Seq n confirming:5126
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGAAGGTGATTGTGCGG
Suggested primer 2:TTGGTGAAGTCCCGTAGTCC