Insertion junction: LMJ.RY0402.063574_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.063574
Chromosome:chromosome 6
Location:3148843
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCGTGGCTCAGGGTGAGAGTCTGCTGTG
Internal bar code:GCCAATCGGGCTTATCCCTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:571
LEAP-Seq percent confirming:99.577
LEAP-Seq n confirming:3296
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:ACGAAACTGCAACCCGTATC
Suggested primer 2:AATGAAGCCGAAGTTCGAGA