Insertion junction: LMJ.RY0402.063621_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.063621
Chromosome:chromosome 1
Location:4124624
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGGCGATAATCCAGTGGGCTCCACCACG
Internal bar code:GAGTGAGGTGAGTTATGGGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:868
LEAP-Seq percent confirming:99.4962
LEAP-Seq n confirming:5332
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:GATGCTGTACCCACACATCG
Suggested primer 2:CTTCAGTTCGTCCTTAGCCG