Insertion junction: LMJ.RY0402.066675_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.066675
Chromosome:chromosome 16
Location:5282754
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGCCACACTGAGGTCAACTCATTGCCT
Internal bar code:TATGGGTAGTTGGGTCAGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:564
LEAP-Seq percent confirming:99.6226
LEAP-Seq n confirming:528
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCCTTACGATAGGTGCCC
Suggested primer 2:GTGGGCGAGTCTTGGTATGT