Insertion junction: LMJ.RY0402.067291_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.067291
Chromosome:chromosome 9
Location:854183
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g401700 (1 of 1) PTHR16193:SF0 - TETRATRICOPEPTIDE REPEAT PROTEIN 27 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTCGAGAGACTCAAACACGCGGATGGCA
Internal bar code:GAATACCAAGCGTTACCGCCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:178
LEAP-Seq percent confirming:54.2553
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:86
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CCTAGAGATACAGGCCAGCG
Suggested primer 2:AGGAGAGGAAGGAGCAGGAG