Insertion junction: LMJ.RY0402.067452_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.067452
Chromosome:chromosome 6
Location:3006128
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g273700 HCF136 (1 of 1) PTHR32010//PTHR32010:SF6 - FAMILY NOT NAMED // PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC; Photosystem II stability/assembly factor HCF136 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGTGTCGGCGTAAAGAGCACAGGGCAGT
Internal bar code:GTCTAGTCCCAATGGGTGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:463
LEAP-Seq percent confirming:87.0312
LEAP-Seq n confirming:3597
LEAP-Seq n nonconfirming:536
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCAACAGACAACTTGGAG
Suggested primer 2:TGATCCTGGTGAATTCGTGA