Insertion junction: LMJ.RY0402.069226_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.069226
Chromosome:chromosome 4
Location:3728697
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g229300 RCA1 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase 1, chloroplastic intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTATCTAGATGGCTTGCAAGCCGACTAAA
Internal bar code:CGTTAAACCGGTGTGTCGCCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:910
LEAP-Seq percent confirming:99.7059
LEAP-Seq n confirming:1356
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCGCTGATGTCAGCACTACC
Suggested primer 2:AGGAATCCTACCGAGCGTTT