Insertion junction: LMJ.RY0402.070304_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.070304
Chromosome:chromosome 6
Location:5108219
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g281050 VPS5A (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGTCACCGTGTCAAGCGTGTTGATGTGA
Internal bar code:GCGGAACTGGAACGCCAGTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:766
LEAP-Seq percent confirming:91.2145
LEAP-Seq n confirming:2959
LEAP-Seq n nonconfirming:285
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTGTTATGCGGTAGGTA
Suggested primer 2:AGTTGCTGGTGCGAAGAAAT