Insertion junction: LMJ.RY0402.070346_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.070346
Chromosome:chromosome 3
Location:1888809
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGCCAAGCGCCCGTTTACTGGGATCTGG
Internal bar code:AGCGATAGAGTTCCGACACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:362
LEAP-Seq percent confirming:99.793
LEAP-Seq n confirming:2410
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGAAATGGAGAAGGAGGAGG
Suggested primer 2:GTTGTAGTACTCGCCTCCCG