Insertion junction: LMJ.RY0402.074845_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.074845
Chromosome:chromosome 9
Location:4132225
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g393765 LMR1 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACATGTGATATACTGGCCGAAGAGGCT
Internal bar code:CGATTCGCGCTTTCGCCGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:879
LEAP-Seq percent confirming:99.4668
LEAP-Seq n confirming:2052
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTTATCTCTGACCCCTC
Suggested primer 2:GAAGTGCAGCGGAGTTATCC