Insertion junction: LMJ.RY0402.075115_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.075115
Chromosome:chromosome 16
Location:5270569
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCATCCGAACTTCGTTGCCGCCGTAT
Internal bar code:CCGAATAACAGGAGGCAGGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:71
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CTTGAAATCTTCGGCTCAGG
Suggested primer 2:AGCTGCTGTTGAACGTGTTG