Insertion junction: LMJ.RY0402.076011_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.076011
Chromosome:chromosome 6
Location:104061
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g249750 (1 of 1) PF07382//PF13374 - Histone H1-like nucleoprotein HC2 (HC2) // Tetratricopeptide repeat (TPR_10) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACCCAGCACGCCTAGTTCCCTGGTTCC
Internal bar code:AACTTGCTCCTTCACGCGAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:274
LEAP-Seq percent confirming:66.497
LEAP-Seq n confirming:784
LEAP-Seq n nonconfirming:395
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTCAGGTTTTGTGACGGT
Suggested primer 2:GTCCCCGTGCCATAAGTAGA