Insertion junction: LMJ.RY0402.076426_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.076426
Chromosome:chromosome 12
Location:1361083
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g488450 VSP3 (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall glycoprotein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCTCGAACCGCTACTACTCGTACTGGT
Internal bar code:GACACGGTGGGCAACATTGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:664
LEAP-Seq percent confirming:84.6354
LEAP-Seq n confirming:2275
LEAP-Seq n nonconfirming:413
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTCAGACATCAGCAGT
Suggested primer 2:CACCGCTCATGTCTTCGTAA