Insertion junction: LMJ.RY0402.077818_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.077818
Chromosome:chromosome 2
Location:1997858
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATCCAGGATGCCTCAGACATCAAGGTGT
Internal bar code:GATCTGATGGTTCGGGCAGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:381
LEAP-Seq percent confirming:98.743
LEAP-Seq n confirming:1414
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGAAAAAGGCTGTGCTGG
Suggested primer 2:CCTTGTCCTGGTCCTGTTGT