Insertion junction: LMJ.RY0402.077818_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.077818
Chromosome:chromosome 2
Location:1997860
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATGATAGTTGGTGACCACGTGTCCGGT
Internal bar code:ATGAGCCGGCAGAGTCATGAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:98.6952
LEAP-Seq n confirming:1891
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGTCCTGGTCCTGTTGT
Suggested primer 2:GAAGAAAAAGGCTGTGCTGG