Insertion junction: LMJ.RY0402.078410_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.078410
Chromosome:chromosome 9
Location:3083187
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g387000 CGL34 (1 of 4) PF11891 - Domain of unknown function (DUF3411) (DUF3411); Conserved in the Green Lineage 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTAAGTCATGGTCACAGTGTGTAAGCTGA
Internal bar code:TCGGGTACACTTTCGTAGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:265
LEAP-Seq percent confirming:91.5633
LEAP-Seq n confirming:4135
LEAP-Seq n nonconfirming:381
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGGCATTGTTTTCGGGA
Suggested primer 2:GGGTGACCCTTGTAAAGCAA