Insertion junction: LMJ.RY0402.078654_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.078654
Chromosome:chromosome 5
Location:2762699
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236950 SRH11 (1 of 1) K14440 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12] (SMARCAL1, HARP); SNF2-related DNA/RNA helicase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAAATGCCGATCCGACAAACACCCCCT
Internal bar code:TGTGTTTCACATTTGGATCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:99.556
LEAP-Seq n confirming:9865
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTGGTTGACTTGACG
Suggested primer 2:ACAATAACGGCACGTTGTCA