Insertion junction: LMJ.RY0402.079442_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.079442
Chromosome:chromosome 3
Location:6315035
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACCGTAGTCCACAGACCTTAGTAGCACT
Internal bar code:AGTGCGATGCCTGCGAAGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:450
LEAP-Seq percent confirming:98.6278
LEAP-Seq n confirming:575
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGCAGCAGAATGTATGCG
Suggested primer 2:GTCAGGCTGCAGTTTGTTCA