Insertion junction: LMJ.RY0402.081060_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.081060
Chromosome:chromosome 10
Location:2592149
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g437150 PPR6,CYCR5 PentatricoPeptide Repeat protein 6; (1 of 2) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACAGCTCGCTGATCAGCGCCTGCGAGAA
Internal bar code:TTCGGGGATGCCTCGCCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:549
LEAP-Seq percent confirming:98.7594
LEAP-Seq n confirming:3423
LEAP-Seq n nonconfirming:43
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGGGATAGTTAGGAGGC
Suggested primer 2:TCTCTCCTCAGCGGTTCATT