Insertion junction: LMJ.RY0402.081839_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.081839
Chromosome:chromosome 6
Location:2891472
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g272200 (1 of 3) PF08238 - Sel1 repeat (Sel1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAATGCTGGAACTGCTTATGACAATTGGCC
Internal bar code:AGGGCTATCTTGCGCAAGATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:99.7014
LEAP-Seq n confirming:7012
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGCATATGAGCAGTCGG
Suggested primer 2:ATGTATCTGTACGGCCAGGG