Insertion junction: LMJ.RY0402.082272_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.082272
Chromosome:chromosome 9
Location:4553618
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g396139 (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCCCACCTGGTTTGGCTTGGTTTGGT
Internal bar code:GGGACATATAAAGCCCGTTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:256
LEAP-Seq percent confirming:99.7491
LEAP-Seq n confirming:1590
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTCACTATACGCACCCCC
Suggested primer 2:GTAGGTTCGCAGTAGCTGGC