Insertion junction: LMJ.RY0402.083911_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.083911
Chromosome:chromosome 6
Location:5548814
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g285250 LHCBM6 (1 of 6) K08912 - light-harvesting complex II chlorophyll a/b binding protein 1 (LHCB1); Light-harvesting Chloropyll a/b binding protein of LHCII type I, chloroplast precursor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGATCCATGCCGCCGTACGAGGTCACC
Internal bar code:TGTGGAGCTGTGCGGCAACTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:691
LEAP-Seq percent confirming:99.0146
LEAP-Seq n confirming:4622
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTCGCGTTCTCAGAGTAGGG
Suggested primer 2:GCATTCAGGCATATGTGGTG