Insertion junction: LMJ.RY0402.083945_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.083945
Chromosome:chromosome 6
Location:6169346
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g290400 HDA5 (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCGTTGCGCACCCACCTGGTGTGTGCT
Internal bar code:CGGCTAGACGTATCCCCGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:445
LEAP-Seq percent confirming:99.5071
LEAP-Seq n confirming:1817
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTTTGAGTTGCGGTCTG
Suggested primer 2:ATCTGTGACTCCTGGCTGCT