Insertion junction: LMJ.RY0402.084685_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.084685
Chromosome:chromosome 5
Location:2771248
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236950 SRH11 (1 of 1) K14440 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12] (SMARCAL1, HARP); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTGGGGATGTACGGCAGGCAATTTTAA
Internal bar code:CTAATTCGGATGTACAGTTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:114
LEAP-Seq percent confirming:99.2797
LEAP-Seq n confirming:827
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTTGTCCCTACCGCTT
Suggested primer 2:ATGGGACAGTGGTAAGGCAG