Insertion junction: LMJ.RY0402.087810_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.087810
Chromosome:chromosome 13
Location:2248674
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g578650 CPLD10,NUOAF5,HCF173 (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED; PSII biogenesis protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGAAACCACGCCCCCGACCAGGAGGGGG
Internal bar code:GAGTGGGCGTTGTTGGTGGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:565
LEAP-Seq percent confirming:98.8894
LEAP-Seq n confirming:6055
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCCAGTGGAGAGCGATAC
Suggested primer 2:GCGCCTACTAAGCACACACA