Insertion junction: LMJ.RY0402.088828_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.088828
Chromosome:chromosome 16
Location:5241889
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) CDS/intron|outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGTGTTACTTGCCTTAGTACTTCAGAT
Internal bar code:GTGCATATTTAGGTACAATGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:72
LEAP-Seq percent confirming:4.55199
LEAP-Seq n confirming:95
LEAP-Seq n nonconfirming:1992
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAGAGCATAACGTTGGT
Suggested primer 2:TAGCATCCTACAGCGCCTTT