Insertion junction: LMJ.RY0402.090713_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.090713
Chromosome:chromosome 14
Location:3736304
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre14.g632050 POB25,RPG1,RPGRIP1 Retinitis pigmentosa GTPase regulator-interacting protein 1; (1 of 1) PF11618 - First C2 domain of RPGR-interacting protein 1 (C2-C2_1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACTCATGATGCGCGTGTCTGCTGACAA
Internal bar code:ATGGGATACGCCATCAAGGGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:130
LEAP-Seq percent confirming:85.6736
LEAP-Seq n confirming:903
LEAP-Seq n nonconfirming:151
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTCCTGCTGCTACAGCCAT
Suggested primer 2:TGGCGTCCTTTTATACTGGC