Insertion junction: LMJ.RY0402.091214_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.091214
Chromosome:chromosome 16
Location:5278462
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTTATTTTTTAACACAGAAGAGCTTCT
Internal bar code:GAATATGTAATACTCAATCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:730
LEAP-Seq percent confirming:92.1875
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGTGAGCTTGTCAATGT
Suggested primer 2:ATGGTGGTCATAGAGGTCGC