Insertion junction: LMJ.RY0402.093311_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.093311
Chromosome:chromosome 17
Location:1270617
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g705450 LCI26 Low-CO2-induced U-box protein; (1 of 1) PTHR22849//PTHR22849:SF45 - WDSAM1 PROTEIN // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTGTGGGTTTGCCACAGACCCTGTACGTA
Internal bar code:GATCTCTTGGATTAAATATAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:195
LEAP-Seq percent confirming:89.011
LEAP-Seq n confirming:2835
LEAP-Seq n nonconfirming:350
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGTGGTTGTGTAGGGCTT
Suggested primer 2:AAGCTGTGGAGTTAGGGGGT