Insertion junction: LMJ.RY0402.093639_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.093639
Chromosome:chromosome 17
Location:2876464
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g719500 AOF9 (1 of 2) 1.3.99.29 - Phytoene desaturase (zeta-carotene-forming) / 2-step phytoene desaturase; Flavin-containing amine oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGACTGCACACTTTACACTGCAATAGTCA
Internal bar code:TGGGGAAGTTACACCCGCGGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:249
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:195
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GATCCGGGTGATGTGTAACC
Suggested primer 2:CAAATCAGGGTGAGGGAGAA