Insertion junction: LMJ.RY0402.096248_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.096248
Chromosome:chromosome 16
Location:5256487
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTTGCAGGTAATAATTTGGAACCGGGCC
Internal bar code:CCCTGGCACGGCGCTATACGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:216
LEAP-Seq percent confirming:77.8478
LEAP-Seq n confirming:1729
LEAP-Seq n nonconfirming:492
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGCCGCTCCTAGCATACA
Suggested primer 2:GATTGAGACTGTGGGGCCTA