Insertion junction: LMJ.RY0402.100268_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.100268
Chromosome:chromosome 11
Location:1325455
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGGTTGCGAGAATCAAACGCCAAGCG
Internal bar code:GATCGAGCAAGGTTCACCGATA

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:76.5455
LEAP-Seq n confirming:4445
LEAP-Seq n nonconfirming:1362
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GATTTGACAACACGCACACC
Suggested primer 2:TCGAGCTCACGAACACAATC