Insertion junction: LMJ.RY0402.105856_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.105856
Chromosome:chromosome 6
Location:5003422
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g280050 ROC86,XRN1 (1 of 1) K12618 - 5'-3' exoribonuclease 1 (XRN1, SEP1, KEM1); 5' to 3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTACATGCGCACGCGCGTCTCTTGCTGGCA
Internal bar code:TCGAAACTACCTCCTTCCCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:639
LEAP-Seq percent confirming:99.3284
LEAP-Seq n confirming:4289
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCGACTTCTACCCCGAC
Suggested primer 2:AACTTGGTGAGGAATGTGGC