Insertion junction: LMJ.RY0402.106172_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.106172
Chromosome:chromosome 1
Location:4129642
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCGGGTCAATCCAGAGGCGGCCTGCTCA
Internal bar code:CGCTTTCGACCGCGGCGGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:656
LEAP-Seq percent confirming:97.9898
LEAP-Seq n confirming:2486
LEAP-Seq n nonconfirming:51
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:TAGGACATGAGCAGGAGGCT
Suggested primer 2:GGAAAAGGACGTTGAAGACG