Insertion junction: LMJ.RY0402.108908_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.108908
Chromosome:chromosome 17
Location:3892041
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTTTTGCGCTCGCCCACATGCAAGTCTGG
Internal bar code:GCGGAAGTCTTATTGTGAATTT

Confirmation - LEAP-Seq

LEAP-Seq distance:625
LEAP-Seq percent confirming:97.2973
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GAACACACACGGATGCAAAC
Suggested primer 2:AAGGCATGTGCCATCATGTA