Insertion junction: LMJ.RY0402.109512_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.109512
Chromosome:chromosome 10
Location:3083618
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g441650 (1 of 1) PF06650//PF16908 - SHR-binding domain of vacuolar-sorting associated protein 13 (SHR-BD) // Vacuolar sorting-associated protein 13, N-terminal (VPS13) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGCATACGCATGCGCCTTCACGATGGCCC
Internal bar code:AATGGCGGCACATGTGCGTAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:870
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:181
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GGATACCTCGTGGTGCTTGT
Suggested primer 2:GAGCAGGTCATCAGCACAAA