Insertion junction: LMJ.RY0402.114517_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.114517
Chromosome:chromosome 6
Location:5110537
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g281050 VPS5A (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGTGTACCGGGGCGGATGCGATGGGGAG
Internal bar code:GTGGGTATGCAAAGGGAGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:859
LEAP-Seq percent confirming:91.9419
LEAP-Seq n confirming:3674
LEAP-Seq n nonconfirming:322
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCACTCCACCTTGCTGTG
Suggested primer 2:GTGCAAGACGCGCTGTAATA