Insertion junction: LMJ.RY0402.117676_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.117676
Chromosome:chromosome 6
Location:5003726
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g280050 ROC86,XRN1 (1 of 1) K12618 - 5'-3' exoribonuclease 1 (XRN1, SEP1, KEM1); 5' to 3' exoribonuclease intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACACGAGTTGACGAATGCCCAAGCCCC
Internal bar code:GACCTTGGACGGTTTTTTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:903
LEAP-Seq percent confirming:99.6885
LEAP-Seq n confirming:960
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATCCTAGAGCCTGAGTG
Suggested primer 2:AACTTGGTGAGGAATGTGGC