Insertion junction: LMJ.RY0402.118974_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.118974
Chromosome:chromosome 6
Location:6169136
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g290400 HDA5 (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6; RPD3/HDA1 type histone deacetylase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGGGCCCAAGTCCGGTCCTGTGTGGGTC
Internal bar code:AATACTCTGCCGGCTCATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:441
LEAP-Seq percent confirming:99.4884
LEAP-Seq n confirming:3889
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGTTTGAGTTGCGGTCTG
Suggested primer 2:ATCTGTGACTCCTGGCTGCT