Insertion junction: LMJ.RY0402.119572_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.119572
Chromosome:chromosome 8
Location:4105929
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre08.g379650 TIC20 20 kDa translocon at the inner membrane of chloroplasts 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACACCCTCGGTCAAGACCGCAGAGTCCGG
Internal bar code:GTCTATTTTCGAGCCTCCGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:175
LEAP-Seq percent confirming:99.6587
LEAP-Seq n confirming:876
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AATCAATTGAGCGACCTTGG
Suggested primer 2:GCTTGGGTAGCAGTGGATGT