Gene: Cre08.g379650
Overview
| Common name: | TIC20 |
| Defline: | 20 kDa translocon at the inner membrane of chloroplasts |
| Description: | Similar to Tic20 from Pisum sativum (AAC64607); has three predicted transmembrane domains; sequence alignment implies localisation within the inner membrane of chloroplast and interactions with Tic22 and Tic110; TargetP prediction: chloroplast (0.985; con |
| Synonyms: | g8938.t1,Cre08.g379650.t1.1,TIC20 |
| Chromosome: | chromosome 8 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC1D12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
chloroplast envelope/not homogeneous/patches
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| LMJ.RY0402.097208_1 | LMJ.RY0402.097208 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.097208_2 | LMJ.RY0402.097208 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.119572_1 | LMJ.RY0402.119572 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.149806_1 | LMJ.RY0402.149806 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.224538_1 | LMJ.RY0402.224538 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.224538_2 | LMJ.RY0402.224538 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT1G04940.1 |
| Best arabidopsis TAIR symbol: | TIC20 |
| Best arabidopsis TAIR defline: | translocon at the inner envelope membrane of chloroplasts 20 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.