Insertion junction: LMJ.RY0402.119871_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.119871
Chromosome:chromosome 6
Location:3007305
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g273700 HCF136 (1 of 1) PTHR32010//PTHR32010:SF6 - FAMILY NOT NAMED // PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC; Photosystem II stability/assembly factor HCF136 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTCCATATATGCCCGGCCCACCCCAACGC
Internal bar code:AGAGGTGTCACGGACTCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:568
LEAP-Seq percent confirming:99.651
LEAP-Seq n confirming:571
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACATAAAGCCGTGGTTCGTC
Suggested primer 2:AATCCCACAAAAGGCTTCCT