Insertion junction: LMJ.RY0402.122911_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.122911
Chromosome:chromosome 12
Location:3453416
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g496350 SSD2 Sterol sensing 5-transmembrane protein; (1 of 1) PF02460//PF12349 - Patched family (Patched) // Sterol-sensing domain of SREBP cleavage-activation (Sterol-sensing) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTAGGCCTACTGCGTGTGTTGCAAAAGCAG
Internal bar code:ATAGTATTCAAAGGTGGTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:132
LEAP-Seq percent confirming:99.8901
LEAP-Seq n confirming:909
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:ATCATAAAGACCGCCGTGAC
Suggested primer 2:ATGCGCATACATAGCAGCAG