Gene: Cre12.g496350

Overview

Common name:	SSD2
Defline:	Sterol sensing 5-transmembrane protein; (1 of 1) PF02460//PF12349 - Patched family (Patched) // Sterol-sensing domain of SREBP cleavage-activation (Sterol-sensing)
Description:	Contains a sterol sensing 5-transmembrane domain similar to those in SCAP, Patched, NPC1 and HMGR
Synonyms:	SSD2,Cre12.g496350.t1.1,g12658.t1
Chromosome:	chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.015317_1	CLIP2.015317	CDS	80	6.1
CLIP2.015317_2	CLIP2.015317	CDS	80	6.1
CLIP2.027987_1	CLIP2.027987	CDS	80	6.1
CLIP2.027987_2	CLIP2.027987	CDS	80	6.1
CLIP2.034340_1	CLIP2.034340	CDS	80	6.1
CLIP2.034340_2	CLIP2.034340	CDS	80	6.1
CLIP2.038293_1	CLIP2.038293	CDS	80	6.1
CLIP2.038293_2	CLIP2.038293	CDS	80	6.1
CLIP2.044329_1	CLIP2.044329	CDS	80	6.1
CLIP2.044329_2	CLIP2.044329	CDS	80	6.1
LMJ.RY0402.042312_1	LMJ.RY0402.042312	5'UTR	95	5.5
LMJ.RY0402.042312_2	LMJ.RY0402.042312	5'UTR	95	5.5
LMJ.RY0402.055580_1	LMJ.RY0402.055580	intron	73	5.5
LMJ.RY0402.093174_1	LMJ.RY0402.093174	intron	58	5.5
LMJ.RY0402.116221_1	LMJ.RY0402.116221	intron	73	5.5
LMJ.RY0402.122911_1	LMJ.RY0402.122911	intron	95	5.5
LMJ.RY0402.122911_2	LMJ.RY0402.122911	intron	95	5.5
LMJ.RY0402.126604_1	LMJ.RY0402.126604	intron	73	5.5
LMJ.RY0402.205828_1	LMJ.RY0402.205828	CDS	73	5.5
LMJ.RY0402.208191_2	LMJ.RY0402.208191	intron	73	5.5
LMJ.SG0182.013556_1	LMJ.SG0182.013556	3'UTR	75	5.3

Gene Annotations

PFAM:	PF02460, PF12349
PANTHER:	PTHR10796 PTHR10796:SF116
KEGG_ec:
KEGG_orthology:
KOG:	KOG1934
Gene ontology terms::	GO:0008158, GO:0016020, GO:0016021
Best arabidopsis TAIR name:	AT4G38350.2
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:	Patched family protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.