Insertion junction: LMJ.RY0402.129255_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.129255
Chromosome:chromosome_10
Location:3198366
Confidence (%):58
Locus systematic id Locus common name Defline Orientation Feature
Cre10.g442600 XUV5,UAPA2 Xanthine/uracil/vitamin C permease-like antisense 3'UTR

Insertion site details

Flanking sequence (orientation from cassette outwards):TTGTCGTGTGTGTTCGGGGTTATGAATGCG
Internal bar code:TTACCTCGTCAACCTTTGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:706
LEAP-Seq percent confirming:77.8194
LEAP-Seq n confirming:1456
LEAP-Seq n nonconfirming:415
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCGTCGGTCTAATAAACA
Suggested primer 2:GTAGATGCCATGCAAGCTCA